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CivicSciTimes - Stories in Science

Swimming in the Sea of Mysteries

CSM Lab

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 – Hyunseung Hong – 

[dropcap]F[/dropcap]or as long as I can remember, my scientific pursuits have given me the eyes to see and understand the world around me. I was intrigued by science because it allowed me to better understand how my body worked. Ergo, it mattered and made sense for me to pursue studies in science. I was drawn to courses that allowed me to develop an intuition to understand the architecture of the designs of human anatomy and medical devices/prosthetics.

I found myself enjoying biochemistry which combined my previously incomplete and understanding of organic chemistry, physical chemistry, and molecular biology to explain their relevance and applications in medicine, physiology, pharmacology, etc. Becoming knowledgeable about what happens within, and around my body gave meaning to everything I experienced. I understood why a healthy diet mattered. I was lifting weights in the most

Hyungseung Hong

mechanically safe, yet challenging way for greater muscle workouts. It was eye-opening! Constantly witnessing science’s relevance and application to the human health propelled me to continue to explore science, and exploit its potential in protecting and recuperating our bodies.

In addition to the revealing character of science, the mysterious side adds to its charm. For me, this dual nature of science acts as a quencher and a stimulus of one’s curiosity. While science is full of undisclosed “truths,” it is also a tool for discoveries. Perhaps science is like a magic show; an audience watching the magician’s performance enjoy the sense of wonder. They are actively investigating to reveal the trick. Sometimes the effort succeeds and sometimes it fails. Similarly, researchers are itched by the unknowns and irresistibly dig to uncover. And, the effort may result in a success or a lack of success (I abstained from using the word “failure” because, in science, all efforts count).

I find science’s bipolar nature of being revealing and mysterious very addictive. It is like eating spicy curry which burns the tongue and peels off the roof of the mouth.

At Stanford, I swam in the sea of uncertainty. For three years, I worked as a student researcher in a neurobiology and physiology lab to study the relationship between circadian rhythms and neural plasticity in Down syndrome model mice. The topic was veiled in mystery and trying to uncover this mystery was challenging but fun. I participated in setting up the protocol, performing brain surgeries, and analyzing behavioral and histological data. After three years of hard work, I managed to generate some data, which revealed a pattern, but it lacked statistical significance.

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Though it was premature to draw any conclusions, we were excited to see a small pattern consistent with our original hypothesis. Of course, this data might have been completely wrong; a misleading coincidence. But seeing a flash of what might have been a light of truth washed away the failures and disappointments of the past three years. This convinced me that research is something I would like to do in the future.

I find science’s bipolar nature of being revealing and mysterious very addictive. It is like eating spicy curry which burns the tongue and peels off the roof of the mouth. And yet, we still end up enjoying it. I understand that a scientific journey, swimming in the sea of mysteries, can be tough. However, the joy of discovery and innovation can be very satisfying.

I am currently a second year in dental school, and I am constantly reassured about my decision to pursue dentistry. Huh? Dentistry? After graduating from Stanford, I returned to my home country, South Korea, to pursue a Doctor of Dental Surgery degree at Seoul National University School of Dentistry. Partly, my dream might have been influenced by my orthodontist father. But, the career decision was based on a strong urge to use my gifts and knowledge meaningfully by interacting with and benefitting people. Dentistry is where science, dexterity, and service intersected.

Here, I realize that the field of dentistry combines satisfying amounts of engineering, biology, materials, and dexterity, with its undeniable connection to human health and comfort. Also, its utilization of scientific technologies like 3D printing and image reconstruction, new materials shows a great potential for innovations and research. I wish to make myself meaningful by making patients comfortable and by indulging in research at the forefront of dental innovation. Science has been a significant part of my life in the past, and it will continue to be the source of meaning, wonder, and knowledge in the future.

Featured image is by Daniel Friesenecker from Pixabay | CC0 Creative Commons 

CivicSciTimes - Stories in Science

Unexpected Stories and Spindle Mistakes: Discovering that Wild-type Cells are Full of Surprises

CSM Lab

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Natalie Nannas

Natalie Nannas is an Associate Professor of Biology at Hamilton College in Clinton, NY. She teaches courses in genetics, molecular biology, and bioethics. Dr. Nannas graduated from Grinnell College with bachelor’s degrees in biological chemistry and French. She received her Master’s and PhD from Harvard University in molecular biology and genetics. Dr. Nannas conducted her postdoctoral research at the University of Georgia where she won a National Science Foundation Plant Genome Postdoctoral Fellowship. At Hamilton College, Dr. Nannas enjoys teaching and sharing her passion for microscopy with her undergraduate research students. When not glued to a microscope, she loves spending time with her husband and two daughters. The narrative below by Natalie Nannas captures the human stories behind the science from a 2022 paper titled “Frequent spindle errors require structural rearrangement to complete meiosis in Zea mays” which was published by her group in 2022 in the International Journal of Molecular Sciences.

Science never works out the way we plan. As scientists, we ask questions, hypothesize and outline our goals … then reality of science occurs. The reality of science is often full of failed controls, endless troubleshooting, and sometimes strange findings that lead us in new and unpredictable directions. Our publications give the impression that we planned these scientific journeys from the beginning and do not tell the human side of the process with all of its twists and turns, dead-ends and U-turns. I want to tell you the real story behind my first publication as a faculty member with my own lab. It did not go as planned due to the COVID-19 pandemic. My lab was shut down in the middle of our investigation, and my students and I were unable to generate new data. In the beginning, it seemed like we were stranded with only control data and no story to tell, but the time away from the lab allowed us to spend more time looking carefully at wild-type cells. What seemed like a dead-end suddenly became its own story when we found something unexpected hiding within microscopy movies. Our wild-type cells were making mistakes, attempting fixes and changing directions, just like we do as scientists.

My scientific journey began with flickering green lights and a microscope (you can read more about it here). As an undergraduate, I was mesmerized by the beauty of watching living cells shuffle fluorescently labeled proteins throughout their cytoplasm. I followed this passion for microscopy into my doctoral dissertation research at Harvard University where I investigated how yeast cells build the machinery needed to pull their chromosomes apart. This machinery is a dynamic collection of long protein tubes called microtubules and other organizing proteins that help move and shuffle microtubules. I loved watching the delicate dance of chromosomes interacting with microtubules of the spindle, and I wanted to continue studying this process in my postdoctoral studies.

During postdoctoral studies at the University of Georgia, I won a fellowship from the National Science Foundation to develop a new technique in microscopy. No one had ever watched plants building their spindles in meiosis, the specialized cell division that produces egg and sperm. Other scientists had performed beautiful microscopy studies observing how mitotic spindles function inside of plant cells, but due to the technical challenges, no one had ever observed live plant cells building spindles in meiosis. I was thrilled to take on this challenge by using version of maize that had fluorescently labeled tubulin, the protein that makes up microtubules of the spindle. With this line of maize, spindles would glow fluorescent green, allowing me to image if only I could extract the meiotic cells.

Dr. Natalie Nannas

We were so busy collecting data and prepping for our mutant studies that we never really took time to analyze the wild-type cells.

After almost a year spent dissecting maize plants, I finally managed to develop a method to isolate these tiny cells and keep them alive in a growth media long enough to image them. This new method of live imaging was going to serve as the foundation of my new lab at Hamilton College, a primarily undergraduate institution. With my students, I planned to investigate the pathways governed spindle assembly. Most animal mitotic cells have a structure called a centrosome that dictates how spindles are formed; however, female animal meiotic cells lack these structures and must use other pathways to direct spindle assembly. Plants also lack centrosomes, and I wanted to inhibit these known animal pathways in our plant live imaging system.

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As I set up my lab, my students and I collected live movies of wild-type maize cells building their spindles. I told my students and myself that these movies were not the main event, they were just the control cells so we would have a baseline comparison for our experimental conditions. We were so busy collecting data and prepping for our mutant studies that we never really took the time to analyze the wild-type cells. At the surface level, they built spindles and segregated chromosomes in a generally expected amount of time, so we focused on preparing for our upcoming experiments…. then March 2020 occurred.

The pandemic forced us to slow down and look more carefully at our wild-type data, and I am grateful for the detour.

My students headed home for spring break with a warning that there may be a delay in coming back to campus due to the spread of COVID-19. None of us were prepared for the shutdown that followed. Like many colleges and universities, our campus was closed for the remainder of the spring 2020 semester and the summer of 2020. My students and I began meeting on Zoom, trying to make a new plan for our research. The only data we had to work with were the microscopy of wild-type maize cells, so we decided to spend time digging more deeply into these movies. Originally, we had only measured the total time it took to build a spindle as it would be a baseline for comparison to our mutants. We had not looked carefully at any of the intermediate time points in the assembly process. When my students looked more closely at our movies, they discovered that wild-type cells built an incorrectly shaped spindle over 60% of the time!

We found that maize meiotic cells often built spindles with three poles instead of two, and they had to actively rearrange their spindle structure to correct this mistake. We also found that in these cells, there was a delay in meiosis as cells refused to progress until this correction had been made. This is an exciting discovery as it showed that plants are error-prone in their spindle assembly, much like human female meiotic cells. Our findings also suggested that meiotic cells were monitoring their spindle shape when determining if they should move forward in meiosis. Previous work has shown that cells monitor the attachment of chromosomes to the spindle to make this decision, but our work adds a new dimension, showing that they also monitor spindle shape. As we continued to analyze our videos, we also learned that cells corrected their spindle morphology in a predictable way. They always collapsed the two poles that were closest together, creating a single pole and resulting in a correct bipolar spindle.

The image shows the first page of the paper which can be accessed here.

My students and I had begun our scientific journey planning to breeze over wild-type cells, moving on to what we envisioned would be a more exciting story of spindle mutants. The pandemic forced us to slow down and look more carefully at our wild-type data, and I am grateful for the detour. I rediscovered my love of closely watching flickering green fluorescent lights, the dance of microtubules sliding into place or making missteps and shuffling into new arrangements. Watching life attempt a complicated process, make mistakes, and try again, is a lesson that never grows old. It reminds me that our scientific journeys are just the same, they start in one direction but are fluid and constantly changing, and hopefully, they end with a functional spindle!

Read the Published Paper

Weiss, J.D., McVey, S.L., Stinebaugh, S.E., Sullivan, C.F., Dawe, R.K., and N.J. Nannas. 2022. Frequent spindle errors require structural rearrangement to complete meiosis in Zea maysInternational Journal of Molecular Sciences, 23 (8):4293–4312.

ABOUT: Stories in Science is a special series on the Civic Science Times. The main aim is to document the first-hand accounts of the human stories behind the science being published by scientists around the world. Such stories are an important element behind the civic nature of science.

SUBMISSION: Click here to access the story guidelines and submission portal. Please note that not all stories are accepted for publication. After submission, we will let you know whether we have selected the story for the review process.

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